Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 AC003669.1-201ENST00000334569 611 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 AP006288.1-201ENST00000446065 395 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 IGHV3-52-201ENST00000519770 353 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 MIR3197-201ENST00000582241 73 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 STK25P1-201ENST00000585406 838 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 AC005593.1-201ENST00000624894 515 ntBASIC15.1■□□□□ 0.01
NKX6-1P78426 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 MYCLP1-201ENST00000372451 1075 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
NKX6-1P78426 PRYP5-201ENST00000451909 266 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
NKX6-1P78426 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.09■□□□□ 0.01
NKX6-1P78426 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 AC005829.1-201ENST00000570002 483 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 AC064836.3-201ENST00000607928 673 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.09■□□□□ 0.01
NKX6-1P78426 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.09■□□□□ 0.01
NKX6-1P78426 PGM5P2-202ENST00000637225 1043 ntBASIC15.09■□□□□ 0.01
NKX6-1P78426 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NKX6-1P78426 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NKX6-1P78426 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NKX6-1P78426 AC008764.6-201ENST00000595909 2069 ntBASIC15.08■□□□□ 0.01
NKX6-1P78426 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
NKX6-1P78426 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX6-1P78426 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX6-1P78426 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.08■□□□□ 0.01
NKX6-1P78426 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX6-1P78426 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NKX6-1P78426 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
NKX6-1P78426 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
NKX6-1P78426 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX6-1P78426 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NKX6-1P78426 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
NKX6-1P78426 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.08■□□□□ 0
NKX6-1P78426 KLF4P1-201ENST00000412782 1185 ntBASIC15.08■□□□□ 0
NKX6-1P78426 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.08■□□□□ 0
NKX6-1P78426 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.08■□□□□ 0
NKX6-1P78426 AL020989.1-201ENST00000422979 469 ntBASIC15.08■□□□□ 0
NKX6-1P78426 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NKX6-1P78426 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NKX6-1P78426 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms