Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC092933.1-201ENST00000393644 945 ntBASIC20.11■□□□□ 0.81
CNTNAP1P78357 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AL353732.1-201ENST00000569618 1459 ntBASIC20.11■□□□□ 0.81
CNTNAP1P78357 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC133963.1-201ENST00000504166 1679 ntBASIC20.11■□□□□ 0.81
CNTNAP1P78357 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP1P78357 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CNTNAP1P78357 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP1P78357 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 RNU1-129P-201ENST00000384064 167 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 BCYRN1-201ENST00000418539 200 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 AC009477.1-201ENST00000452936 217 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 U1.21-201ENST00000580816 167 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 MIR4259-201ENST00000584466 101 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 TMEM261P1-201ENST00000604899 340 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 MIR6787-201ENST00000616675 61 ntBASIC20.09■□□□□ 0.81
CNTNAP1P78357 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNTNAP1P78357 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP1P78357 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP1P78357 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CNTNAP1P78357 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 WASH6P-202ENST00000359512 1437 ntBASIC20.08■□□□□ 0.8
CNTNAP1P78357 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP1P78357 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP1P78357 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP1P78357 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms