Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ACLYP53396 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.65■□□□□ 0.58
ACLYP53396 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.65■□□□□ 0.58
ACLYP53396 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 MPDU1-223ENST00000582151 728 ntBASIC18.65■□□□□ 0.58
ACLYP53396 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.65■□□□□ 0.58
ACLYP53396 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 AC012317.2-201ENST00000623305 2251 ntBASIC18.65■□□□□ 0.58
ACLYP53396 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.64■□□□□ 0.58
ACLYP53396 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ACLYP53396 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ACLYP53396 EGFEM1P-202ENST00000431685 1563 ntBASIC18.64■□□□□ 0.58
ACLYP53396 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
ACLYP53396 AL355312.1-201ENST00000407115 2176 ntBASIC18.64■□□□□ 0.57
ACLYP53396 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.64■□□□□ 0.57
ACLYP53396 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.64■□□□□ 0.57
ACLYP53396 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.64■□□□□ 0.57
ACLYP53396 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.64■□□□□ 0.57
ACLYP53396 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACLYP53396 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.64■□□□□ 0.57
ACLYP53396 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
ACLYP53396 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.64■□□□□ 0.57
ACLYP53396 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACLYP53396 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ACLYP53396 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ACLYP53396 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.63■□□□□ 0.57
ACLYP53396 HLA-V-204ENST00000476601 1289 ntBASIC18.63■□□□□ 0.57
ACLYP53396 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.63■□□□□ 0.57
ACLYP53396 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 AC073389.1-201ENST00000595595 795 ntBASIC18.63■□□□□ 0.57
ACLYP53396 AC021097.1-201ENST00000607902 574 ntBASIC18.63■□□□□ 0.57
ACLYP53396 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.63■□□□□ 0.57
ACLYP53396 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACLYP53396 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
ACLYP53396 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ACLYP53396 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms