Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CENPFP49454 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.02■□□□□ 0.63
CENPFP49454 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.02■□□□□ 0.63
CENPFP49454 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.02■□□□□ 0.63
CENPFP49454 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.02■□□□□ 0.63
CENPFP49454 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CENPFP49454 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.02■□□□□ 0.63
CENPFP49454 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.02■□□□□ 0.63
CENPFP49454 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CENPFP49454 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.02■□□□□ 0.63
CENPFP49454 AC068587.10-201ENST00000641210 219 ntBASIC19.02■□□□□ 0.63
CENPFP49454 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CENPFP49454 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 AL355994.2-201ENST00000447882 704 ntBASIC19.01■□□□□ 0.63
CENPFP49454 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.01■□□□□ 0.63
CENPFP49454 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 AC027307.2-201ENST00000591252 911 ntBASIC19.01■□□□□ 0.63
CENPFP49454 MIR6775-201ENST00000617557 69 ntBASIC19.01■□□□□ 0.63
CENPFP49454 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.01■□□□□ 0.63
CENPFP49454 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.01■□□□□ 0.63
CENPFP49454 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CENPFP49454 AC142381.1-201ENST00000426099 345 ntBASIC19.01■□□□□ 0.63
CENPFP49454 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CENPFP49454 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.01■□□□□ 0.63
CENPFP49454 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19■□□□□ 0.63
CENPFP49454 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19■□□□□ 0.63
CENPFP49454 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CENPFP49454 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 AL080243.2-201ENST00000418783 582 ntBASIC19■□□□□ 0.63
CENPFP49454 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 AC002558.1-201ENST00000488906 803 ntBASIC19■□□□□ 0.63
CENPFP49454 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19■□□□□ 0.63
CENPFP49454 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CENPFP49454 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19■□□□□ 0.63
CENPFP49454 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19■□□□□ 0.63
CENPFP49454 CD74-212ENST00000524315 584 ntTSL 5 BASIC19■□□□□ 0.63
CENPFP49454 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19■□□□□ 0.63
CENPFP49454 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.99■□□□□ 0.63
CENPFP49454 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.99■□□□□ 0.63
CENPFP49454 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 AC092933.1-201ENST00000393644 945 ntBASIC18.99■□□□□ 0.63
CENPFP49454 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.99■□□□□ 0.63
CENPFP49454 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.99■□□□□ 0.63
CENPFP49454 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.99■□□□□ 0.63
CENPFP49454 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.99■□□□□ 0.63
CENPFP49454 SLC7A15P-201ENST00000424028 1363 ntBASIC18.99■□□□□ 0.63
CENPFP49454 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.99■□□□□ 0.63
CENPFP49454 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 AC098614.1-201ENST00000368528 745 ntBASIC18.99■□□□□ 0.63
CENPFP49454 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.99■□□□□ 0.63
CENPFP49454 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 RARRES2P9-201ENST00000565168 469 ntBASIC18.99■□□□□ 0.63
CENPFP49454 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.99■□□□□ 0.63
CENPFP49454 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CENPFP49454 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
CENPFP49454 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.99■□□□□ 0.63
CENPFP49454 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CENPFP49454 ZNF890P-202ENST00000530367 1156 ntBASIC18.98■□□□□ 0.63
CENPFP49454 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms