Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SIGLEC16-201ENST00000599858 1437 ntBASIC18.62■□□□□ 0.57
RFX1P22670 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RFX1P22670 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RFX1P22670 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX1P22670 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFX1P22670 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFX1P22670 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 RPSAP43-201ENST00000402237 625 ntBASIC18.61■□□□□ 0.57
RFX1P22670 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX1P22670 SPDYE21P-201ENST00000413323 827 ntBASIC18.61■□□□□ 0.57
RFX1P22670 ACTG1P4-201ENST00000425123 1122 ntBASIC18.61■□□□□ 0.57
RFX1P22670 SIGLEC30P-201ENST00000455569 941 ntBASIC18.61■□□□□ 0.57
RFX1P22670 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.61■□□□□ 0.57
RFX1P22670 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX1P22670 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX1P22670 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFX1P22670 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX1P22670 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX1P22670 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX1P22670 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RFX1P22670 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFX1P22670 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RFX1P22670 GPR89P-201ENST00000407924 1495 ntBASIC18.6■□□□□ 0.57
RFX1P22670 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX1P22670 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX1P22670 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX1P22670 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX1P22670 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX1P22670 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX1P22670 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX1P22670 Z83851.2-201ENST00000609564 659 ntBASIC18.6■□□□□ 0.57
RFX1P22670 AP001269.4-201ENST00000609611 512 ntBASIC18.6■□□□□ 0.57
RFX1P22670 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX1P22670 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX1P22670 AC073592.4-201ENST00000623827 446 ntBASIC18.6■□□□□ 0.57
RFX1P22670 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX1P22670 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RFX1P22670 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RFX1P22670 NKILA-202ENST00000614771 2598 ntBASIC18.59■□□□□ 0.57
RFX1P22670 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 AC092053.1-201ENST00000605787 1936 ntBASIC18.59■□□□□ 0.57
RFX1P22670 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RFX1P22670 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX1P22670 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX1P22670 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RFX1P22670 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
RFX1P22670 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX1P22670 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.59■□□□□ 0.57
RFX1P22670 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX1P22670 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.59■□□□□ 0.57
RFX1P22670 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RFX1P22670 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.59■□□□□ 0.57
RFX1P22670 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.59■□□□□ 0.57
RFX1P22670 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX1P22670 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms