Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VCLP18206 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 AC105020.1-201ENST00000435356 2205 ntBASIC17.24■□□□□ 0.35
VCLP18206 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VCLP18206 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 KRT8P10-201ENST00000450021 1447 ntBASIC17.23■□□□□ 0.35
VCLP18206 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 AL020989.1-201ENST00000422979 469 ntBASIC17.23■□□□□ 0.35
VCLP18206 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 FAM197Y8-203ENST00000450145 560 ntBASIC17.23■□□□□ 0.35
VCLP18206 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.23■□□□□ 0.35
VCLP18206 AP002469.2-201ENST00000531724 424 ntBASIC17.23■□□□□ 0.35
VCLP18206 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.23■□□□□ 0.35
VCLP18206 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 AC019129.2-201ENST00000609837 1235 ntBASIC17.23■□□□□ 0.35
VCLP18206 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.23■□□□□ 0.35
VCLP18206 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.23■□□□□ 0.35
VCLP18206 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCLP18206 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VCLP18206 AC079776.2-201ENST00000641154 1609 ntBASIC17.22■□□□□ 0.35
VCLP18206 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.22■□□□□ 0.35
VCLP18206 RPS2P28-201ENST00000314255 741 ntBASIC17.22■□□□□ 0.35
VCLP18206 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.22■□□□□ 0.35
VCLP18206 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.22■□□□□ 0.35
VCLP18206 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 AC104692.2-201ENST00000603054 253 ntBASIC17.22■□□□□ 0.35
VCLP18206 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.22■□□□□ 0.35
VCLP18206 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
VCLP18206 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
VCLP18206 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCLP18206 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 DOC2GP-204ENST00000639052 2548 ntBASIC17.21■□□□□ 0.35
VCLP18206 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms