Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 BCAR1-209ENST00000546196 1340 ntBASIC18.04■□□□□ 0.48
PTPN1P18031 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PTPN1P18031 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN1P18031 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 AC124947.2-201ENST00000547118 1133 ntBASIC18.04■□□□□ 0.48
PTPN1P18031 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN1P18031 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 AC002347.1-201ENST00000569543 541 ntBASIC18.04■□□□□ 0.48
PTPN1P18031 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN1P18031 AC007064.4-201ENST00000637740 555 ntBASIC18.04■□□□□ 0.48
PTPN1P18031 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTPN1P18031 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PTPN1P18031 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
PTPN1P18031 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 BX842568.4-201ENST00000421222 227 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 AC004832.2-201ENST00000426397 482 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 AL513480.1-201ENST00000451731 511 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.03■□□□□ 0.48
PTPN1P18031 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN1P18031 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC092865.5-201ENST00000545435 363 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC023141.13-201ENST00000604991 943 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC099398.1-201ENST00000567919 2776 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 AC025580.3-201ENST00000617932 1424 ntBASIC18.03■□□□□ 0.48
PTPN1P18031 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN1P18031 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN1P18031 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PTPN1P18031 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTPN1P18031 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
PTPN1P18031 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PTPN1P18031 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.02■□□□□ 0.48
PTPN1P18031 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PTPN1P18031 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN1P18031 KRT19P2-202ENST00000557173 1012 ntBASIC18.02■□□□□ 0.48
PTPN1P18031 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PTPN1P18031 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN1P18031 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms