Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.64■□□□□ 0.57
VTNP04004 TSEN15P1-201ENST00000423257 515 ntBASIC18.64■□□□□ 0.57
VTNP04004 AL671277.1-201ENST00000429656 993 ntBASIC18.64■□□□□ 0.57
VTNP04004 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 KRT8P48-201ENST00000515599 1220 ntBASIC18.64■□□□□ 0.57
VTNP04004 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.64■□□□□ 0.57
VTNP04004 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.64■□□□□ 0.57
VTNP04004 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 AC093028.1-201ENST00000622998 982 ntBASIC18.64■□□□□ 0.57
VTNP04004 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
VTNP04004 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 AL353732.1-201ENST00000569618 1459 ntBASIC18.64■□□□□ 0.57
VTNP04004 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VTNP04004 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.64■□□□□ 0.57
VTNP04004 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
VTNP04004 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTNP04004 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VTNP04004 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.63■□□□□ 0.57
VTNP04004 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.63■□□□□ 0.57
VTNP04004 RFPL4AP1-201ENST00000530883 850 ntBASIC18.63■□□□□ 0.57
VTNP04004 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 DUX4L17-201ENST00000557360 1267 ntBASIC18.63■□□□□ 0.57
VTNP04004 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VTNP04004 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VTNP04004 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 TOP3BP1-201ENST00000420768 1380 ntBASIC18.63■□□□□ 0.57
VTNP04004 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.63■□□□□ 0.57
VTNP04004 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTNP04004 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.62■□□□□ 0.57
VTNP04004 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.62■□□□□ 0.57
VTNP04004 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.62■□□□□ 0.57
VTNP04004 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.62■□□□□ 0.57
VTNP04004 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.62■□□□□ 0.57
VTNP04004 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
VTNP04004 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.62■□□□□ 0.57
VTNP04004 AC026120.1-201ENST00000611536 926 ntBASIC18.62■□□□□ 0.57
VTNP04004 AC106028.4-201ENST00000614509 607 ntBASIC18.62■□□□□ 0.57
VTNP04004 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
VTNP04004 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VTNP04004 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VTNP04004 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VTNP04004 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTNP04004 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VTNP04004 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 LINC00896-202ENST00000609602 2128 ntBASIC18.61■□□□□ 0.57
VTNP04004 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VTNP04004 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VTNP04004 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 AL645939.2-201ENST00000427340 991 ntBASIC18.61■□□□□ 0.57
VTNP04004 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.61■□□□□ 0.57
VTNP04004 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.61■□□□□ 0.57
VTNP04004 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms