Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 AC131009.4-201ENST00000624048 1740 ntBASIC19.28■□□□□ 0.68
ALDH1A1P00352 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 TTTY23B-201ENST00000442790 549 ntBASIC19.27■□□□□ 0.68
ALDH1A1P00352 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ALDH1A1P00352 AL033527.4-201ENST00000641026 673 ntBASIC19.27■□□□□ 0.68
ALDH1A1P00352 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALDH1A1P00352 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ALDH1A1P00352 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALDH1A1P00352 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALDH1A1P00352 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AL133338.1-201ENST00000565695 1517 ntBASIC19.26■□□□□ 0.67
ALDH1A1P00352 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 BCL2-203ENST00000589955 5011 ntBASIC19.26■□□□□ 0.67
ALDH1A1P00352 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 PRYP6-201ENST00000514804 343 ntBASIC19.26■□□□□ 0.67
ALDH1A1P00352 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 AL512343.1-201ENST00000605837 169 ntBASIC19.26■□□□□ 0.67
ALDH1A1P00352 AC007431.3-201ENST00000623221 587 ntBASIC19.26■□□□□ 0.67
ALDH1A1P00352 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ALDH1A1P00352 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALDH1A1P00352 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 AC073130.3-201ENST00000624389 2278 ntBASIC19.25■□□□□ 0.67
ALDH1A1P00352 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.25■□□□□ 0.67
ALDH1A1P00352 AC234783.1-201ENST00000441761 496 ntBASIC19.25■□□□□ 0.67
ALDH1A1P00352 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 WASH4P-201ENST00000564273 1246 ntBASIC19.25■□□□□ 0.67
ALDH1A1P00352 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALDH1A1P00352 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ALDH1A1P00352 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms