Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.4■□□□□ 0.22
GFRA3O60609 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
GFRA3O60609 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.4■□□□□ 0.22
GFRA3O60609 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.4■□□□□ 0.22
GFRA3O60609 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GFRA3O60609 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.4■□□□□ 0.22
GFRA3O60609 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.4■□□□□ 0.22
GFRA3O60609 AP001889.1-201ENST00000525414 633 ntBASIC16.4■□□□□ 0.22
GFRA3O60609 AL512361.1-201ENST00000554200 418 ntBASIC16.4■□□□□ 0.22
GFRA3O60609 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.4■□□□□ 0.22
GFRA3O60609 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
GFRA3O60609 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
GFRA3O60609 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GFRA3O60609 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.4■□□□□ 0.22
GFRA3O60609 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.4■□□□□ 0.22
GFRA3O60609 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 AL353732.1-201ENST00000569618 1459 ntBASIC16.4■□□□□ 0.22
GFRA3O60609 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.4■□□□□ 0.22
GFRA3O60609 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFRA3O60609 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GFRA3O60609 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
GFRA3O60609 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 AL032819.2-201ENST00000624543 2162 ntBASIC16.39■□□□□ 0.21
GFRA3O60609 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.39■□□□□ 0.21
GFRA3O60609 AC006033.1-201ENST00000440505 426 ntBASIC16.39■□□□□ 0.21
GFRA3O60609 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.39■□□□□ 0.21
GFRA3O60609 AC105021.1-202ENST00000570572 669 ntBASIC16.39■□□□□ 0.21
GFRA3O60609 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.39■□□□□ 0.21
GFRA3O60609 AC073389.1-201ENST00000595595 795 ntBASIC16.39■□□□□ 0.21
GFRA3O60609 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GFRA3O60609 MIR8072-201ENST00000614241 80 ntBASIC16.39■□□□□ 0.21
GFRA3O60609 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.39■□□□□ 0.21
GFRA3O60609 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GFRA3O60609 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GFRA3O60609 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.39■□□□□ 0.21
GFRA3O60609 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.39■□□□□ 0.21
GFRA3O60609 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFRA3O60609 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.39■□□□□ 0.21
GFRA3O60609 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.38■□□□□ 0.21
GFRA3O60609 AC009949.1-201ENST00000623048 1830 ntBASIC16.38■□□□□ 0.21
GFRA3O60609 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.38■□□□□ 0.21
GFRA3O60609 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.38■□□□□ 0.21
GFRA3O60609 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
GFRA3O60609 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.38■□□□□ 0.21
GFRA3O60609 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFRA3O60609 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.38■□□□□ 0.21
GFRA3O60609 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms