Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB2O43679 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LDB2O43679 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB2O43679 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LDB2O43679 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.07■□□□□ 0.32
LDB2O43679 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.07■□□□□ 0.32
LDB2O43679 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LDB2O43679 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB2O43679 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB2O43679 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LDB2O43679 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
LDB2O43679 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.06■□□□□ 0.32
LDB2O43679 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LDB2O43679 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDB2O43679 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.06■□□□□ 0.32
LDB2O43679 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
LDB2O43679 AL160237.2-201ENST00000556165 472 ntBASIC17.06■□□□□ 0.32
LDB2O43679 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDB2O43679 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 AC099398.1-201ENST00000567919 2776 ntBASIC17.06■□□□□ 0.32
LDB2O43679 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.06■□□□□ 0.32
LDB2O43679 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 AL645728.1-201ENST00000366221 2101 ntBASIC17.06■□□□□ 0.32
LDB2O43679 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
LDB2O43679 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB2O43679 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB2O43679 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
LDB2O43679 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LDB2O43679 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LDB2O43679 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LDB2O43679 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.05■□□□□ 0.32
LDB2O43679 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 AF228730.7-201ENST00000641842 219 ntBASIC17.05■□□□□ 0.32
LDB2O43679 OR6D1P-202ENST00000641007 5290 ntBASIC17.05■□□□□ 0.32
LDB2O43679 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.05■□□□□ 0.32
LDB2O43679 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LDB2O43679 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LDB2O43679 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms