Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SNPHO15079 AL121761.2-201ENST00000598007 1648 ntBASIC16.31■□□□□ 0.2
SNPHO15079 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNPHO15079 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.31■□□□□ 0.2
SNPHO15079 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SNPHO15079 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SNPHO15079 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC16.31■□□□□ 0.2
SNPHO15079 VN1R53P-201ENST00000429536 957 ntBASIC16.31■□□□□ 0.2
SNPHO15079 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.31■□□□□ 0.2
SNPHO15079 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.31■□□□□ 0.2
SNPHO15079 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 AC063950.1-202ENST00000600133 568 ntBASIC16.31■□□□□ 0.2
SNPHO15079 AC016597.2-201ENST00000613256 341 ntBASIC16.31■□□□□ 0.2
SNPHO15079 AC090506.2-201ENST00000624521 419 ntBASIC16.31■□□□□ 0.2
SNPHO15079 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 FLJ38576-201ENST00000623820 2459 ntBASIC16.31■□□□□ 0.2
SNPHO15079 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 AP001094.4-201ENST00000579008 2176 ntBASIC16.31■□□□□ 0.2
SNPHO15079 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SNPHO15079 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SNPHO15079 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SNPHO15079 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.3■□□□□ 0.2
SNPHO15079 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.3■□□□□ 0.2
SNPHO15079 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.3■□□□□ 0.2
SNPHO15079 AL138831.2-201ENST00000606564 490 ntBASIC16.3■□□□□ 0.2
SNPHO15079 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNPHO15079 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNPHO15079 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.3■□□□□ 0.2
SNPHO15079 MTCO1P15-201ENST00000529569 1526 ntBASIC16.29■□□□□ 0.2
SNPHO15079 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.29■□□□□ 0.2
SNPHO15079 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 AC125634.1-201ENST00000438758 1403 ntBASIC16.29■□□□□ 0.2
SNPHO15079 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.29■□□□□ 0.2
SNPHO15079 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNPHO15079 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNPHO15079 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNPHO15079 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNPHO15079 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.29■□□□□ 0.2
SNPHO15079 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNPHO15079 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.29■□□□□ 0.2
SNPHO15079 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms