Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.45■□□□□ 0.86
SEMA3EO15041 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SEMA3EO15041 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SEMA3EO15041 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 LINC00896-202ENST00000609602 2128 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SEMA3EO15041 AL139400.1-201ENST00000366220 510 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SEMA3EO15041 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SEMA3EO15041 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 AL627223.1-201ENST00000416693 442 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 AL645939.2-201ENST00000427340 991 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 AC079140.1-201ENST00000508039 487 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 AC243562.1-201ENST00000560672 389 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 AL355385.1-201ENST00000606123 409 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.44■□□□□ 0.86
SEMA3EO15041 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 TUBB8P12-201ENST00000308911 1335 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 TUBB7P-202ENST00000428444 1305 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 TUBB8P7-204ENST00000567960 1332 ntBASIC20.44■□□□□ 0.86
SEMA3EO15041 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
SEMA3EO15041 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.44■□□□□ 0.86
SEMA3EO15041 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEMA3EO15041 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.43■□□□□ 0.86
SEMA3EO15041 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SEMA3EO15041 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 AC093520.2-201ENST00000561830 333 ntBASIC20.43■□□□□ 0.86
SEMA3EO15041 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.43■□□□□ 0.86
SEMA3EO15041 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 AC009093.7-201ENST00000623853 1223 ntBASIC20.43■□□□□ 0.86
SEMA3EO15041 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.43■□□□□ 0.86
SEMA3EO15041 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SEMA3EO15041 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.43■□□□□ 0.86
SEMA3EO15041 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEMA3EO15041 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.43■□□□□ 0.86
SEMA3EO15041 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SEMA3EO15041 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SEMA3EO15041 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.42■□□□□ 0.86
SEMA3EO15041 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.42■□□□□ 0.86
SEMA3EO15041 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SEMA3EO15041 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.42■□□□□ 0.86
SEMA3EO15041 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.42■□□□□ 0.86
SEMA3EO15041 CYP2A7P1-201ENST00000595391 815 ntBASIC20.42■□□□□ 0.86
SEMA3EO15041 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SEMA3EO15041 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SEMA3EO15041 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.42■□□□□ 0.86
SEMA3EO15041 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEMA3EO15041 WASH6P-202ENST00000359512 1437 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms