Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AC005104.2-201ENST00000427818 678 ntBASIC13.1□□□□□ -0.31
COLCA2A8K830 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.1□□□□□ -0.31
COLCA2A8K830 AL139327.4-201ENST00000612362 153 ntBASIC13.1□□□□□ -0.31
COLCA2A8K830 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.1□□□□□ -0.31
COLCA2A8K830 COL6A4P2-202ENST00000504443 2753 ntBASIC13.1□□□□□ -0.31
COLCA2A8K830 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 TMBIM7P-203ENST00000641617 1718 ntBASIC13.1□□□□□ -0.31
COLCA2A8K830 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COLCA2A8K830 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COLCA2A8K830 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COLCA2A8K830 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COLCA2A8K830 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
COLCA2A8K830 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.09□□□□□ -0.31
COLCA2A8K830 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
COLCA2A8K830 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
COLCA2A8K830 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.09□□□□□ -0.31
COLCA2A8K830 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.09□□□□□ -0.31
COLCA2A8K830 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
COLCA2A8K830 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 DGCR9-201ENST00000609630 2415 ntBASIC13.09□□□□□ -0.31
COLCA2A8K830 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.09□□□□□ -0.31
COLCA2A8K830 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COLCA2A8K830 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.08□□□□□ -0.31
COLCA2A8K830 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
COLCA2A8K830 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
COLCA2A8K830 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.08□□□□□ -0.32
COLCA2A8K830 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms