Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PRYP6-201ENST00000514804 343 ntBASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 MIR3615-201ENST00000581999 87 ntBASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 RNA5SP423-201ENST00000517127 109 ntBASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 AC116562.4-201ENST00000641316 2276 ntBASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEM88BA6NKF7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88BA6NKF7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 KLF2P4-201ENST00000451959 1225 ntBASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 RNA5SP412-201ENST00000516234 123 ntBASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.58■□□□□ 0.72
TMEM88BA6NKF7 TOP3BP1-201ENST00000420768 1380 ntBASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 MIR6727-201ENST00000620702 65 ntBASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM88BA6NKF7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 PFN1P12-201ENST00000455938 534 ntBASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 AC018665.1-201ENST00000622927 1362 ntBASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms