Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 ARSEP1-201ENST00000420443 635 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 KRT17P7-201ENST00000451704 1104 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 KRT18P34-201ENST00000488218 1270 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 TP53TG3HP-202ENST00000569755 579 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 MIR4492-201ENST00000581627 80 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 TEX28P1-201ENST00000613479 1221 ntBASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 TEX28P2-201ENST00000617764 1221 ntBASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LOC102724428A0A0B4J2F2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 AL844908.2-201ENST00000609461 460 ntBASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LOC102724428A0A0B4J2F2 KRT8P49-201ENST00000604166 1432 ntBASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 HLA-H-201ENST00000383620 1096 ntBASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 ATP5G2P4-201ENST00000442175 420 ntBASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LOC102724428A0A0B4J2F2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms