Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 HTR5BP-201ENST00000430851 1154 ntBASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AC023141.13-201ENST00000604991 943 ntBASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AC007064.4-201ENST00000637740 555 ntBASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 FAM185BP-201ENST00000443595 716 ntBASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 AP006288.1-201ENST00000446065 395 ntBASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB2Q9Y5E7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 MKNK2P1-201ENST00000437526 628 ntBASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 AC087163.2-201ENST00000457299 853 ntBASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 AC074386.1-202ENST00000463561 864 ntBASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 SLC25A6P2-201ENST00000497974 877 ntBASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 AP001094.4-201ENST00000579008 2176 ntBASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB2Q9Y5E7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms