Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 TSSK5P-201ENST00000423978 907 ntBASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 MRPS18AP1-201ENST00000414458 589 ntBASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 AC004890.2-204ENST00000481968 304 ntBASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC25.09■■□□□ 1.61
SHANK2Q9UPX8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 PKD1P6-201ENST00000343738 4769 ntBASIC25.08■■□□□ 1.61
SHANK2Q9UPX8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 CROCCP2-202ENST00000412962 2773 ntBASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 FAM220BP-201ENST00000377689 816 ntBASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 KRT18P34-201ENST00000488218 1270 ntBASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 BANF1P1-201ENST00000553684 263 ntBASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 AC008761.3-201ENST00000624803 892 ntBASIC25.08■■□□□ 1.6
SHANK2Q9UPX8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC25.07■■□□□ 1.6
SHANK2Q9UPX8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 AC097493.3-201ENST00000509725 367 ntBASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHANK2Q9UPX8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 HLA-H-201ENST00000383620 1096 ntBASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC25.05■■□□□ 1.6
SHANK2Q9UPX8 AC073592.8-201ENST00000624126 511 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms