Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AC099398.1-201ENST00000567919 2776 ntBASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AC004870.1-201ENST00000315132 882 ntBASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 PAWRP1-201ENST00000451083 565 ntBASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AL031008.1-201ENST00000619963 541 ntBASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AL805961.1-202ENST00000641562 540 ntBASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AC073621.1-201ENST00000392730 636 ntBASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 KRT18P67-201ENST00000432816 1264 ntBASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 FAAHP1-202ENST00000446499 1238 ntBASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AC148477.8-201ENST00000624298 468 ntBASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSPG4P5Q96PW8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.59■□□□□ 0.41
CSPG4P5Q96PW8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms