Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLGALT1Q8NBJ5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COLGALT1Q8NBJ5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
COLGALT1Q8NBJ5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 AL035633.1-201ENST00000406139 838 ntBASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 AL139327.4-201ENST00000612362 153 ntBASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLGALT1Q8NBJ5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AL355306.1-201ENST00000415580 579 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AL627223.1-201ENST00000416693 442 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AC093520.2-201ENST00000561830 333 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AC099522.2-201ENST00000607001 744 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AC026120.1-201ENST00000611536 926 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 FZD10-202ENST00000539839 3282 ntBASIC18.38■□□□□ 0.53
COLGALT1Q8NBJ5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 AC005498.2-205ENST00000593218 784 ntBASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 AC009093.7-201ENST00000623853 1223 ntBASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.37■□□□□ 0.53
COLGALT1Q8NBJ5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms