Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EGFEM1P-202ENST00000431685 1563 ntBASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 CROCCP2-202ENST00000412962 2773 ntBASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 FAM185BP-201ENST00000443595 716 ntBASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 AL513480.1-201ENST00000451731 511 ntBASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 RPS8P6-201ENST00000426177 609 ntBASIC18■□□□□ 0.47
SCN4BQ8IWT1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 PDPK2P-202ENST00000562415 1191 ntBASIC18■□□□□ 0.47
SCN4BQ8IWT1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 CYP51A1P2-201ENST00000419457 1499 ntBASIC18■□□□□ 0.47
SCN4BQ8IWT1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCN4BQ8IWT1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18■□□□□ 0.47
SCN4BQ8IWT1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 AC129492.6-201ENST00000611383 1305 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ALG1L5P-201ENST00000482043 771 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 AL078644.1-201ENST00000609881 752 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ACTL9-202ENST00000612068 1252 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 LINC00896-202ENST00000609602 2128 ntBASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCN4BQ8IWT1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 AC074386.1-202ENST00000463561 864 ntBASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 AC005829.1-201ENST00000570002 483 ntBASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms