Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 PMS2P4-201ENST00000412466 1052 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 FAM86C2P-203ENST00000528684 1004 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC140878.1-201ENST00000565277 250 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC116353.5-201ENST00000638148 1699 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 WASH6P-202ENST00000359512 1437 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC005412.3-201ENST00000580309 715 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AC084121.4-201ENST00000641598 221 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 AF228730.8-201ENST00000642140 221 ntBASIC14.47□□□□□ -0.09
RAI1Q7Z5J4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI1Q7Z5J4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
RAI1Q7Z5J4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAI1Q7Z5J4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAI1Q7Z5J4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAI1Q7Z5J4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAI1Q7Z5J4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms