Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC096734.2-201ENST00000562054 433 ntBASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 AL078644.1-201ENST00000609881 752 ntBASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF17Q5VTA0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 AC025580.3-201ENST00000617932 1424 ntBASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 KRT19P2-202ENST00000557173 1012 ntBASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF17Q5VTA0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 AC068880.1-201ENST00000507289 2297 ntBASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 PAWRP1-201ENST00000451083 565 ntBASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 AC004967.1-201ENST00000453589 447 ntBASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF17Q5VTA0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RHOQP3-201ENST00000437982 621 ntBASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 MIR4469-201ENST00000583919 79 ntBASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms