Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.89■□□□□ 0.77
IRX3P78415 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IRX3P78415 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.89■□□□□ 0.77
IRX3P78415 AC109322.1-201ENST00000524499 1264 ntBASIC19.89■□□□□ 0.77
IRX3P78415 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
IRX3P78415 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IRX3P78415 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.89■□□□□ 0.77
IRX3P78415 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.89■□□□□ 0.77
IRX3P78415 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
IRX3P78415 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX3P78415 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX3P78415 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
IRX3P78415 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX3P78415 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
IRX3P78415 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
IRX3P78415 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.88■□□□□ 0.77
IRX3P78415 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 BCRP1-201ENST00000444246 691 ntBASIC19.88■□□□□ 0.77
IRX3P78415 FAM86GP-201ENST00000448322 971 ntBASIC19.88■□□□□ 0.77
IRX3P78415 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.88■□□□□ 0.77
IRX3P78415 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX3P78415 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
IRX3P78415 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
IRX3P78415 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
IRX3P78415 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.88■□□□□ 0.77
IRX3P78415 AL096865.1-201ENST00000606796 927 ntBASIC19.88■□□□□ 0.77
IRX3P78415 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.88■□□□□ 0.77
IRX3P78415 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
IRX3P78415 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX3P78415 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
IRX3P78415 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.88■□□□□ 0.77
IRX3P78415 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX3P78415 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
IRX3P78415 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.88■□□□□ 0.77
IRX3P78415 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
IRX3P78415 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 ADH5P3-201ENST00000433842 1137 ntBASIC19.87■□□□□ 0.77
IRX3P78415 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.87■□□□□ 0.77
IRX3P78415 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.87■□□□□ 0.77
IRX3P78415 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.87■□□□□ 0.77
IRX3P78415 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.87■□□□□ 0.77
IRX3P78415 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
IRX3P78415 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.87■□□□□ 0.77
IRX3P78415 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
IRX3P78415 AL596257.1-201ENST00000641463 2694 ntBASIC19.87■□□□□ 0.77
IRX3P78415 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
IRX3P78415 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX3P78415 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
IRX3P78415 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX3P78415 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
IRX3P78415 REXO1L11P-201ENST00000620964 1927 ntBASIC19.86■□□□□ 0.77
IRX3P78415 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX3P78415 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.86■□□□□ 0.77
IRX3P78415 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.86■□□□□ 0.77
IRX3P78415 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.86■□□□□ 0.77
IRX3P78415 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.86■□□□□ 0.77
IRX3P78415 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
IRX3P78415 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
IRX3P78415 AC026120.1-201ENST00000611536 926 ntBASIC19.86■□□□□ 0.77
IRX3P78415 AL139327.4-201ENST00000612362 153 ntBASIC19.86■□□□□ 0.77
IRX3P78415 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms