Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 LINC00602-201ENST00000629776 2065 ntBASIC17.84■□□□□ 0.45
IRX4P78413 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
IRX4P78413 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.84■□□□□ 0.45
IRX4P78413 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.84■□□□□ 0.45
IRX4P78413 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.84■□□□□ 0.45
IRX4P78413 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.84■□□□□ 0.45
IRX4P78413 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.84■□□□□ 0.45
IRX4P78413 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX4P78413 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
IRX4P78413 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
IRX4P78413 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX4P78413 AC011676.5-201ENST00000624864 2660 ntBASIC17.84■□□□□ 0.45
IRX4P78413 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX4P78413 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
IRX4P78413 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
IRX4P78413 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
IRX4P78413 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.83■□□□□ 0.45
IRX4P78413 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
IRX4P78413 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
IRX4P78413 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.45
IRX4P78413 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
IRX4P78413 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX4P78413 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
IRX4P78413 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 AL356309.3-201ENST00000624132 1934 ntBASIC17.83■□□□□ 0.44
IRX4P78413 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.83■□□□□ 0.44
IRX4P78413 DNAJB3-201ENST00000446806 729 ntBASIC17.83■□□□□ 0.44
IRX4P78413 AC004967.1-201ENST00000453589 447 ntBASIC17.83■□□□□ 0.44
IRX4P78413 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.83■□□□□ 0.44
IRX4P78413 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX4P78413 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX4P78413 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX4P78413 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX4P78413 AC040169.1-201ENST00000565382 521 ntBASIC17.83■□□□□ 0.44
IRX4P78413 AC008687.5-201ENST00000593746 558 ntBASIC17.83■□□□□ 0.44
IRX4P78413 AC011467.2-201ENST00000598425 242 ntBASIC17.83■□□□□ 0.44
IRX4P78413 AL138831.2-201ENST00000606564 490 ntBASIC17.83■□□□□ 0.44
IRX4P78413 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
IRX4P78413 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX4P78413 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.44
IRX4P78413 NKILA-202ENST00000614771 2598 ntBASIC17.83■□□□□ 0.44
IRX4P78413 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX4P78413 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms