Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.29■□□□□ 0.2
GFERP55789 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GFERP55789 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.29■□□□□ 0.2
GFERP55789 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GFERP55789 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GFERP55789 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.29■□□□□ 0.2
GFERP55789 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFERP55789 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GFERP55789 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GFERP55789 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 AC002056.1-201ENST00000395613 760 ntBASIC16.28■□□□□ 0.2
GFERP55789 HMGA1P7-201ENST00000406908 502 ntBASIC16.28■□□□□ 0.2
GFERP55789 AC004461.1-201ENST00000412461 403 ntBASIC16.28■□□□□ 0.2
GFERP55789 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.28■□□□□ 0.2
GFERP55789 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.28■□□□□ 0.2
GFERP55789 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.28■□□□□ 0.2
GFERP55789 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.28■□□□□ 0.2
GFERP55789 AL513210.1-201ENST00000629608 234 ntBASIC16.28■□□□□ 0.2
GFERP55789 AC105339.1-204ENST00000636249 355 ntBASIC16.28■□□□□ 0.2
GFERP55789 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
GFERP55789 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.28■□□□□ 0.2
GFERP55789 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFERP55789 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.27■□□□□ 0.2
GFERP55789 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GFERP55789 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.27■□□□□ 0.2
GFERP55789 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.27■□□□□ 0.2
GFERP55789 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.27■□□□□ 0.2
GFERP55789 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.27■□□□□ 0.2
GFERP55789 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
GFERP55789 AC022145.2-201ENST00000598203 171 ntBASIC16.27■□□□□ 0.2
GFERP55789 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFERP55789 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
GFERP55789 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GFERP55789 PP12613-201ENST00000424958 2230 ntBASIC16.27■□□□□ 0.19
GFERP55789 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
GFERP55789 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GFERP55789 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GFERP55789 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GFERP55789 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GFERP55789 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GFERP55789 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
GFERP55789 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 FRMD8P1-201ENST00000440433 1524 ntBASIC16.26■□□□□ 0.19
GFERP55789 AC012569.1-201ENST00000591191 1524 ntBASIC16.26■□□□□ 0.19
GFERP55789 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.26■□□□□ 0.19
GFERP55789 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFERP55789 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GFERP55789 AL355306.1-201ENST00000415580 579 ntBASIC16.26■□□□□ 0.19
GFERP55789 TIMM8BP1-201ENST00000452384 211 ntBASIC16.26■□□□□ 0.19
GFERP55789 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.26■□□□□ 0.19
GFERP55789 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.26■□□□□ 0.19
GFERP55789 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.26■□□□□ 0.19
GFERP55789 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms