Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.89■□□□□ 0.61
BRCA2P51587 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 RARRES2P9-201ENST00000565168 469 ntBASIC18.89■□□□□ 0.61
BRCA2P51587 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
BRCA2P51587 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCA2P51587 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCA2P51587 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCA2P51587 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BRCA2P51587 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRCA2P51587 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.88■□□□□ 0.61
BRCA2P51587 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 TTTY23B-201ENST00000442790 549 ntBASIC18.88■□□□□ 0.61
BRCA2P51587 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
BRCA2P51587 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRCA2P51587 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCA2P51587 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
BRCA2P51587 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.88■□□□□ 0.61
BRCA2P51587 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.88■□□□□ 0.61
BRCA2P51587 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.88■□□□□ 0.61
BRCA2P51587 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCA2P51587 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
BRCA2P51587 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
BRCA2P51587 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCA2P51587 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 BANF1P1-201ENST00000553684 263 ntBASIC18.87■□□□□ 0.61
BRCA2P51587 CDC14C-201ENST00000428251 1719 ntBASIC18.87■□□□□ 0.61
BRCA2P51587 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRCA2P51587 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCA2P51587 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCA2P51587 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 ELK1P1-201ENST00000485699 580 ntBASIC18.87■□□□□ 0.61
BRCA2P51587 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCA2P51587 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCA2P51587 AC009113.1-201ENST00000570267 2443 ntBASIC18.87■□□□□ 0.61
BRCA2P51587 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 MIR6869-201ENST00000619434 62 ntBASIC18.86■□□□□ 0.61
BRCA2P51587 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 AC098818.2-201ENST00000564925 2320 ntBASIC18.86■□□□□ 0.61
BRCA2P51587 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 TUBB1P2-201ENST00000422712 1306 ntBASIC18.86■□□□□ 0.61
BRCA2P51587 TUBB1P1-201ENST00000503144 1300 ntBASIC18.86■□□□□ 0.61
BRCA2P51587 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRCA2P51587 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCA2P51587 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCA2P51587 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCA2P51587 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms