Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.22■□□□□ 0.03
LHX2P50458 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LHX2P50458 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX2P50458 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.22■□□□□ 0.03
LHX2P50458 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX2P50458 AC005829.1-201ENST00000570002 483 ntBASIC15.22■□□□□ 0.03
LHX2P50458 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX2P50458 AL645728.2-201ENST00000641974 660 ntBASIC15.22■□□□□ 0.03
LHX2P50458 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 PCDHB18P-201ENST00000524813 2368 ntBASIC15.22■□□□□ 0.03
LHX2P50458 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LHX2P50458 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX2P50458 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LHX2P50458 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX2P50458 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX2P50458 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX2P50458 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 HTR5BP-201ENST00000430851 1154 ntBASIC15.21■□□□□ 0.03
LHX2P50458 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 MKNK2P1-201ENST00000437526 628 ntBASIC15.21■□□□□ 0.03
LHX2P50458 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
LHX2P50458 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.21■□□□□ 0.03
LHX2P50458 YBX1P5-201ENST00000509441 847 ntBASIC15.21■□□□□ 0.03
LHX2P50458 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX2P50458 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
LHX2P50458 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
LHX2P50458 MIR4515-201ENST00000584082 81 ntBASIC15.21■□□□□ 0.03
LHX2P50458 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX2P50458 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX2P50458 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX2P50458 AC068137.2-201ENST00000605408 478 ntBASIC15.21■□□□□ 0.03
LHX2P50458 AL078644.1-201ENST00000609881 752 ntBASIC15.21■□□□□ 0.03
LHX2P50458 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX2P50458 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX2P50458 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LHX2P50458 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LHX2P50458 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LHX2P50458 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX2P50458 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LHX2P50458 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LHX2P50458 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LHX2P50458 AC092053.1-201ENST00000605787 1936 ntBASIC15.21■□□□□ 0.02
LHX2P50458 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.21■□□□□ 0.02
LHX2P50458 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LHX2P50458 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LHX2P50458 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LHX2P50458 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LHX2P50458 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 AL353732.1-201ENST00000569618 1459 ntBASIC15.2■□□□□ 0.02
LHX2P50458 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LHX2P50458 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LHX2P50458 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.2■□□□□ 0.02
LHX2P50458 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX2P50458 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX2P50458 AL031432.2-201ENST00000566714 459 ntBASIC15.2■□□□□ 0.02
LHX2P50458 AL928711.1-201ENST00000570165 459 ntBASIC15.2■□□□□ 0.02
LHX2P50458 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LHX2P50458 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX2P50458 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX2P50458 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX2P50458 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX2P50458 AC092919.2-201ENST00000623631 1645 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms