Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 AC211476.1-201ENST00000503899 468 ntBASIC19.42■□□□□ 0.7
HOXA13P31271 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXA13P31271 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA13P31271 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA13P31271 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXA13P31271 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXA13P31271 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXA13P31271 FAM58CP-201ENST00000435741 640 ntBASIC19.41■□□□□ 0.7
HOXA13P31271 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 YBX1P5-201ENST00000509441 847 ntBASIC19.41■□□□□ 0.7
HOXA13P31271 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
HOXA13P31271 AC091812.2-201ENST00000619081 385 ntBASIC19.41■□□□□ 0.7
HOXA13P31271 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXA13P31271 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA13P31271 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA13P31271 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA13P31271 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA13P31271 DUX4L17-201ENST00000557360 1267 ntBASIC19.4■□□□□ 0.7
HOXA13P31271 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA13P31271 AL031432.2-201ENST00000566714 459 ntBASIC19.4■□□□□ 0.7
HOXA13P31271 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA13P31271 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HOXA13P31271 AL928711.1-201ENST00000570165 459 ntBASIC19.4■□□□□ 0.7
HOXA13P31271 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 AC068137.2-201ENST00000605408 478 ntBASIC19.4■□□□□ 0.7
HOXA13P31271 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.4■□□□□ 0.7
HOXA13P31271 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA13P31271 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXA13P31271 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA13P31271 LINC02012-201ENST00000608206 1725 ntBASIC19.39■□□□□ 0.7
HOXA13P31271 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXA13P31271 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXA13P31271 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXA13P31271 DNAJB3-202ENST00000449667 1266 ntBASIC19.39■□□□□ 0.69
HOXA13P31271 AC092183.1-201ENST00000469884 875 ntBASIC19.39■□□□□ 0.69
HOXA13P31271 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 AL596442.2-201ENST00000610240 980 ntBASIC19.39■□□□□ 0.69
HOXA13P31271 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA13P31271 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms