Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CSB-PGBD3P0DP91 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 AC241585.1-201ENST00000433527 519 ntBASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSB-PGBD3P0DP91 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 TDG-209ENST00000544861 1387 ntTSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 AC016027.1-202ENST00000607927 1699 ntBASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CSB-PGBD3P0DP91 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 MIR346-201ENST00000362234 95 ntBASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AC027369.6-201ENST00000525520 931 ntBASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AC027307.3-201ENST00000594262 1100 ntBASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CSB-PGBD3P0DP91 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 BX323043.1-201ENST00000641006 1765 ntBASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 AC004890.2-204ENST00000481968 304 ntBASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 SLC22A20-204ENST00000530038 1673 ntBASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 AC009113.1-201ENST00000570267 2443 ntBASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CSB-PGBD3P0DP91 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms