Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.96■□□□□ 0.47
APOEP02649 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.96■□□□□ 0.47
APOEP02649 AC016396.2-201ENST00000562575 1417 ntBASIC17.96■□□□□ 0.47
APOEP02649 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
APOEP02649 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
APOEP02649 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOEP02649 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
APOEP02649 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
APOEP02649 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
APOEP02649 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.95■□□□□ 0.46
APOEP02649 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.95■□□□□ 0.46
APOEP02649 AC092910.1-201ENST00000482027 1129 ntBASIC17.95■□□□□ 0.46
APOEP02649 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.95■□□□□ 0.46
APOEP02649 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.95■□□□□ 0.46
APOEP02649 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.95■□□□□ 0.46
APOEP02649 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.95■□□□□ 0.46
APOEP02649 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
APOEP02649 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.95■□□□□ 0.46
APOEP02649 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APOEP02649 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.95■□□□□ 0.46
APOEP02649 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
APOEP02649 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
APOEP02649 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOEP02649 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
APOEP02649 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
APOEP02649 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 ELK2BP-201ENST00000415014 1224 ntBASIC17.94■□□□□ 0.46
APOEP02649 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.94■□□□□ 0.46
APOEP02649 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.94■□□□□ 0.46
APOEP02649 AC136632.2-201ENST00000512891 861 ntBASIC17.94■□□□□ 0.46
APOEP02649 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.94■□□□□ 0.46
APOEP02649 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 AC012640.2-201ENST00000561606 901 ntBASIC17.94■□□□□ 0.46
APOEP02649 AL353135.1-201ENST00000606729 504 ntBASIC17.94■□□□□ 0.46
APOEP02649 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.94■□□□□ 0.46
APOEP02649 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
APOEP02649 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
APOEP02649 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
APOEP02649 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.94■□□□□ 0.46
APOEP02649 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOEP02649 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
APOEP02649 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 AC243591.1-201ENST00000452967 1364 ntBASIC17.93■□□□□ 0.46
APOEP02649 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
APOEP02649 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 AL590627.1-203ENST00000421194 1026 ntBASIC17.93■□□□□ 0.46
APOEP02649 KRT18P27-201ENST00000427733 1299 ntBASIC17.93■□□□□ 0.46
APOEP02649 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.93■□□□□ 0.46
APOEP02649 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.93■□□□□ 0.46
APOEP02649 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.93■□□□□ 0.46
APOEP02649 AL356488.2-201ENST00000602755 427 ntBASIC17.93■□□□□ 0.46
APOEP02649 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms