Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SOX30O94993 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.96■□□□□ 0.15
SOX30O94993 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX30O94993 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 PRELID1P1-202ENST00000567272 903 ntBASIC15.96■□□□□ 0.15
SOX30O94993 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX30O94993 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX30O94993 AL355877.3-201ENST00000622820 899 ntBASIC15.96■□□□□ 0.15
SOX30O94993 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SOX30O94993 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.96■□□□□ 0.15
SOX30O94993 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SOX30O94993 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SOX30O94993 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX30O94993 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX30O94993 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SOX30O94993 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX30O94993 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX30O94993 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX30O94993 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SOX30O94993 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX30O94993 LINC00982-205ENST00000420957 435 ntBASIC15.95■□□□□ 0.14
SOX30O94993 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX30O94993 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX30O94993 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX30O94993 AP001269.4-201ENST00000609611 512 ntBASIC15.95■□□□□ 0.14
SOX30O94993 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.95■□□□□ 0.14
SOX30O94993 AL021920.2-201ENST00000624828 1351 ntBASIC15.95■□□□□ 0.14
SOX30O94993 AC011270.2-201ENST00000624293 2550 ntBASIC15.95■□□□□ 0.14
SOX30O94993 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SOX30O94993 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SOX30O94993 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX30O94993 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 AC148477.5-201ENST00000625164 1645 ntBASIC15.94■□□□□ 0.14
SOX30O94993 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX30O94993 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX30O94993 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX30O94993 AL118508.1-201ENST00000613502 2345 ntBASIC15.94■□□□□ 0.14
SOX30O94993 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX30O94993 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SOX30O94993 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX30O94993 MTDHP3-201ENST00000594186 672 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms