Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF2O60811 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF2O60811 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PRAMEF2O60811 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.08■□□□□ 0.17
PRAMEF2O60811 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF2O60811 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 KRT18P27-201ENST00000427733 1299 ntBASIC16.08■□□□□ 0.16
PRAMEF2O60811 KRT18P3-201ENST00000451602 1288 ntBASIC16.08■□□□□ 0.16
PRAMEF2O60811 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 PGAM5P1-201ENST00000518923 814 ntBASIC16.08■□□□□ 0.16
PRAMEF2O60811 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 AL589182.2-201ENST00000619332 1049 ntBASIC16.08■□□□□ 0.16
PRAMEF2O60811 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF2O60811 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF2O60811 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 SLC25A1P3-201ENST00000395415 828 ntBASIC16.07■□□□□ 0.16
PRAMEF2O60811 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 LINC00982-205ENST00000420957 435 ntBASIC16.07■□□□□ 0.16
PRAMEF2O60811 RNA5SP416-201ENST00000516838 111 ntBASIC16.07■□□□□ 0.16
PRAMEF2O60811 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 EGFEM1P-202ENST00000431685 1563 ntBASIC16.07■□□□□ 0.16
PRAMEF2O60811 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.07■□□□□ 0.16
PRAMEF2O60811 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF2O60811 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF2O60811 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF2O60811 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF2O60811 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF2O60811 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.06■□□□□ 0.16
PRAMEF2O60811 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF2O60811 AC009947.1-201ENST00000444350 727 ntBASIC16.06■□□□□ 0.16
PRAMEF2O60811 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF2O60811 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.06■□□□□ 0.16
PRAMEF2O60811 AC136632.2-201ENST00000512891 861 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms