Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC28A2O43868 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC28A2O43868 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC28A2O43868 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC28A2O43868 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SLC28A2O43868 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC28A2O43868 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC28A2O43868 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC28A2O43868 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC28A2O43868 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SLC28A2O43868 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A2O43868 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A2O43868 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A2O43868 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A2O43868 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC28A2O43868 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC28A2O43868 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SLC28A2O43868 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 BX276092.7-203ENST00000637198 1536 ntBASIC16.51■□□□□ 0.23
SLC28A2O43868 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A2O43868 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC28A2O43868 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A2O43868 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A2O43868 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC28A2O43868 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC28A2O43868 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC28A2O43868 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC28A2O43868 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC28A2O43868 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC28A2O43868 AL356309.3-201ENST00000624132 1934 ntBASIC16.51■□□□□ 0.23
SLC28A2O43868 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SLC28A2O43868 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC28A2O43868 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC28A2O43868 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 AP001094.4-201ENST00000579008 2176 ntBASIC16.5■□□□□ 0.23
SLC28A2O43868 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC28A2O43868 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms