Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AC124947.2-201ENST00000547118 1133 ntBASIC19.3■□□□□ 0.68
LOC285556D6RIA3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 WASH4P-201ENST00000564273 1246 ntBASIC19.3■□□□□ 0.68
LOC285556D6RIA3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC285556D6RIA3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 MPDU1-223ENST00000582151 728 ntBASIC19.29■□□□□ 0.68
LOC285556D6RIA3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 PIN1P1-201ENST00000412108 996 ntBASIC19.29■□□□□ 0.68
LOC285556D6RIA3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 AC008738.7-201ENST00000609744 511 ntBASIC19.29■□□□□ 0.68
LOC285556D6RIA3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC285556D6RIA3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LOC285556D6RIA3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 OR8S1-201ENST00000310194 1080 ntBASIC19.27■□□□□ 0.68
LOC285556D6RIA3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 AL596325.1-201ENST00000563991 1082 ntBASIC19.27■□□□□ 0.68
LOC285556D6RIA3 AC003101.2-201ENST00000612557 442 ntBASIC19.27■□□□□ 0.68
LOC285556D6RIA3 AL358472.5-202ENST00000641448 1267 ntBASIC19.27■□□□□ 0.68
LOC285556D6RIA3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LOC285556D6RIA3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LOC285556D6RIA3 AC073439.1-201ENST00000624121 1774 ntBASIC19.27■□□□□ 0.67
LOC285556D6RIA3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms