Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 AL355306.1-201ENST00000415580 579 ntBASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 FAM207CP-201ENST00000443486 507 ntBASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 AL512356.2-201ENST00000546955 174 ntBASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC107890.1-201ENST00000422478 521 ntBASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 IGHV3-52-201ENST00000519770 353 ntBASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AP005018.1-201ENST00000525475 301 ntBASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 AC009336.1-201ENST00000608941 1553 ntBASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRABD2BA6NFA1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 AC008764.6-201ENST00000595909 2069 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 AC093010.1-201ENST00000473625 1624 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 KRT18P32-201ENST00000424695 1287 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 HLA-V-201ENST00000429037 534 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 ACTL9-202ENST00000612068 1252 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 AP001059.3-201ENST00000619053 235 ntBASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.42■□□□□ 0.22
TRABD2BA6NFA1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms