Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PLEKHD1A6NEE1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PLEKHD1A6NEE1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC26.03■■□□□ 1.76
PLEKHD1A6NEE1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PLEKHD1A6NEE1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 KRT17P7-201ENST00000451704 1104 ntBASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 MIR4492-201ENST00000581627 80 ntBASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PLEKHD1A6NEE1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 CDK2AP2P3-201ENST00000422476 372 ntBASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 U91328.1-201ENST00000437528 223 ntBASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 AC087499.5-201ENST00000452760 1342 ntBASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 AL035456.1-201ENST00000456064 1369 ntBASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 AC008738.7-201ENST00000609744 511 ntBASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PLEKHD1A6NEE1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SLC25A1P3-201ENST00000395415 828 ntBASIC26■■□□□ 1.75
PLEKHD1A6NEE1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 ARSEP1-201ENST00000420443 635 ntBASIC26■■□□□ 1.75
PLEKHD1A6NEE1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC26■■□□□ 1.75
PLEKHD1A6NEE1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26■■□□□ 1.75
PLEKHD1A6NEE1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 KRT8P49-201ENST00000604166 1432 ntBASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC25.99■■□□□ 1.75
PLEKHD1A6NEE1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms