Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 AC079776.1-201ENST00000401540 1152 ntBASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 ZNF890P-202ENST00000530367 1156 ntBASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 AC004233.3-201ENST00000607794 1269 ntBASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPBQ9Y5S2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 AC009407.1-201ENST00000568958 598 ntBASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPBQ9Y5S2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 KRT18P34-201ENST00000488218 1270 ntBASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC25.48■■□□□ 1.67
CDC42BPBQ9Y5S2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 PGF-202ENST00000405431 666 ntTSL 5 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 AC104794.3-201ENST00000566840 1248 ntBASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 AC073439.1-201ENST00000624121 1774 ntBASIC25.47■■□□□ 1.67
CDC42BPBQ9Y5S2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 MPDU1-223ENST00000582151 728 ntBASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 SPDYE18-201ENST00000510091 1050 ntBASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 IGHV3-71-201ENST00000523324 359 ntBASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 AC108860.2-201ENST00000562760 2183 ntBASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CDC42BPBQ9Y5S2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
CDC42BPBQ9Y5S2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPBQ9Y5S2 RPL37AP1-201ENST00000412502 279 ntBASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms