Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AGGF1P2-201ENST00000426656 2106 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 AP002414.3-201ENST00000589352 1468 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 AC078925.2-201ENST00000624013 1973 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 MRPL3P1-201ENST00000400109 1033 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 IGHV3-65-201ENST00000523210 341 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 MIR7706-201ENST00000613747 67 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 MIR1199-201ENST00000621445 119 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 AC002310.6-201ENST00000624451 1377 ntBASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC3Q9UN70 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 AC011676.5-201ENST00000624864 2660 ntBASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 SLC25A6P2-201ENST00000497974 877 ntBASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 SLC25A6P4-201ENST00000586535 553 ntBASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 REXO1L3P-201ENST00000622202 1288 ntBASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGC3Q9UN70 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 TOP3BP1-201ENST00000420768 1380 ntBASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHGC3Q9UN70 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 AL662844.1-201ENST00000546340 181 ntBASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 AL049840.3-201ENST00000602669 611 ntBASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms