Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AL365434.2-201ENST00000607979 234 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AP001437.1-201ENST00000608783 456 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AC127071.2-201ENST00000623293 527 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AC009084.3-201ENST00000623356 437 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 SLC25A24-204ENST00000569674 2357 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AL078595.2-201ENST00000605309 1780 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 AL603750.1-201ENST00000624216 1717 ntBASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-2Q9BYR7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC067942.1-201ENST00000488045 1493 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC092338.2-201ENST00000568827 1415 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 C11orf96-202ENST00000528572 1834 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC090877.2-201ENST00000558441 1738 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 RNU6-1318P-201ENST00000365389 103 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 NDUFB5P2-201ENST00000398690 566 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AL354751.2-201ENST00000415471 210 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 OSTCP5-201ENST00000425293 453 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 ARL6IP1P2-201ENST00000431356 563 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 GOLGA5P1-201ENST00000507317 980 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC110056.1-201ENST00000525759 911 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 NPM1P5-201ENST00000557228 838 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC122134.1-201ENST00000565664 1104 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AL354943.1-201ENST00000572103 781 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AL159169.3-201ENST00000608871 561 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AC013476.2-201ENST00000614456 459 ntBASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 AL136181.1-201ENST00000454484 1924 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-2Q9BYR7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 RNY4P24-201ENST00000362735 96 ntBASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 RNU1-35P-201ENST00000362782 153 ntBASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 MLANA-201ENST00000381471 1000 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 KRT18P10-201ENST00000388836 1287 ntBASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-2Q9BYR7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms