Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 AP001527.2-201ENST00000614441 631 ntBASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 AL353726.2-201ENST00000623259 884 ntBASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COL25A1Q9BXS0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC091812.3-201ENST00000621362 345 ntBASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AC005082.1-201ENST00000413042 2259 ntBASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 AIRN-201ENST00000601203 4374 ntBASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 BX276092.7-203ENST00000637198 1536 ntBASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL25A1Q9BXS0 KRT8P22-201ENST00000562317 1415 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 SERBP1P3-201ENST00000459980 809 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 RN7SL720P-201ENST00000488178 304 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 AC002558.1-201ENST00000488906 803 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 AC245884.6-201ENST00000515672 1067 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 AC005357.2-202ENST00000590507 1060 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.04■□□□□ 0.32
COL25A1Q9BXS0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms