Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 TSEN15P1-201ENST00000423257 515 ntBASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 AP000344.2-201ENST00000512987 629 ntBASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 AC099522.2-201ENST00000607001 744 ntBASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 AC112191.1-201ENST00000523689 701 ntBASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC85AQ96PX6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 SLC25A1P3-201ENST00000395415 828 ntBASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 AL645939.2-201ENST00000427340 991 ntBASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 AC004835.2-201ENST00000603762 682 ntBASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC85AQ96PX6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 ADH5P3-201ENST00000433842 1137 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms