Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.24■□□□□ 0.51
SHC3Q92529 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SHC3Q92529 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
SHC3Q92529 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SHC3Q92529 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.24■□□□□ 0.51
SHC3Q92529 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 ELK2BP-201ENST00000415014 1224 ntBASIC18.24■□□□□ 0.51
SHC3Q92529 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SHC3Q92529 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 AC006504.4-201ENST00000592118 1568 ntBASIC18.24■□□□□ 0.51
SHC3Q92529 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
SHC3Q92529 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SHC3Q92529 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHC3Q92529 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SHC3Q92529 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SHC3Q92529 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 AL021920.2-201ENST00000624828 1351 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 PTCHD3P3-201ENST00000403073 906 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 KRT18P27-201ENST00000427733 1299 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 AP002490.2-201ENST00000524791 560 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SHC3Q92529 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 AC006557.2-201ENST00000592985 1240 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 AL805961.1-202ENST00000641562 540 ntBASIC18.23■□□□□ 0.51
SHC3Q92529 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SHC3Q92529 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHC3Q92529 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHC3Q92529 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.23■□□□□ 0.51
SHC3Q92529 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
SHC3Q92529 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHC3Q92529 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SHC3Q92529 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.22■□□□□ 0.51
SHC3Q92529 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SHC3Q92529 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms