Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATL1Q8WXF7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.76■□□□□ 0.27
ATL1Q8WXF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATL1Q8WXF7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATL1Q8WXF7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATL1Q8WXF7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 LINC00982-205ENST00000420957 435 ntBASIC16.75■□□□□ 0.27
ATL1Q8WXF7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.75■□□□□ 0.27
ATL1Q8WXF7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 NKAPP1-205ENST00000585790 367 ntBASIC16.75■□□□□ 0.27
ATL1Q8WXF7 AC008608.2-201ENST00000606089 416 ntBASIC16.75■□□□□ 0.27
ATL1Q8WXF7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 NCF1C-201ENST00000438382 1427 ntBASIC16.75■□□□□ 0.27
ATL1Q8WXF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATL1Q8WXF7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 AC018695.7-201ENST00000624587 2492 ntBASIC16.74■□□□□ 0.27
ATL1Q8WXF7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 BX005266.1-201ENST00000473402 457 ntBASIC16.74■□□□□ 0.27
ATL1Q8WXF7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 AC004817.3-201ENST00000602957 2129 ntBASIC16.74■□□□□ 0.27
ATL1Q8WXF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATL1Q8WXF7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATL1Q8WXF7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms