Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AKR1C7P-201ENST00000305623 895 ntBASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 FGFR3P6-201ENST00000457012 610 ntBASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 UNC93B7-201ENST00000509439 705 ntBASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AF238378.1-201ENST00000526806 358 ntBASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 NKILA-202ENST00000614771 2598 ntBASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC116Q8IYX3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC106886.4-201ENST00000623557 2502 ntBASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC011676.5-201ENST00000624864 2660 ntBASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SAPCD2P3-201ENST00000455031 850 ntBASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SART3-203ENST00000546611 1184 ntBASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 AC005915.1-201ENST00000624912 2018 ntBASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC116Q8IYX3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms