Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 AC055717.3-201ENST00000622967 595 ntBASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 AC025580.3-201ENST00000617932 1424 ntBASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AL691403.2-201ENST00000618460 490 ntBASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 AC007064.4-201ENST00000637740 555 ntBASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCN4BQ8IWT1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 MCCD1P2-201ENST00000423228 335 ntBASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 RHOQP3-201ENST00000437982 621 ntBASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 KRT19P2-202ENST00000557173 1012 ntBASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 AC023141.13-201ENST00000604991 943 ntBASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SCN4BQ8IWT1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SCN4BQ8IWT1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCN4BQ8IWT1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms