Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AC064862.7-201ENST00000604520 867 ntBASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC71Q8IV32 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC116407.2-201ENST00000613639 860 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AL773604.1-201ENST00000617417 272 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC114341.1-201ENST00000618070 349 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AF228730.7-201ENST00000641842 219 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC011270.2-201ENST00000624293 2550 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 PCDHA1-201ENST00000378133 2726 ntBASIC16.09■□□□□ 0.17
CCDC71Q8IV32 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC71Q8IV32 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC71Q8IV32 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC71Q8IV32 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC71Q8IV32 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CCDC71Q8IV32 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AC006538.3-201ENST00000612495 578 ntBASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AC148477.8-201ENST00000624298 468 ntBASIC16.08■□□□□ 0.16
CCDC71Q8IV32 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 AL391005.1-201ENST00000623953 2435 ntBASIC16.08■□□□□ 0.16
CCDC71Q8IV32 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms