Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 FAM220CP-201ENST00000395253 831 ntBASIC16.87■□□□□ 0.29
SYVN1Q86TM6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 AC117500.6-201ENST00000624871 588 ntBASIC16.87■□□□□ 0.29
SYVN1Q86TM6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 AL118508.1-201ENST00000613502 2345 ntBASIC16.87■□□□□ 0.29
SYVN1Q86TM6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 FLJ38576-201ENST00000623820 2459 ntBASIC16.87■□□□□ 0.29
SYVN1Q86TM6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
SYVN1Q86TM6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 INTS4P1-201ENST00000438455 1935 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AC103564.2-201ENST00000432853 1299 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AC018712.1-201ENST00000455767 687 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 FGFR3P6-201ENST00000457012 610 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 STK25P1-201ENST00000585406 838 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 MTDHP3-201ENST00000594186 672 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AC011467.2-201ENST00000598425 242 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AF228730.7-201ENST00000641842 219 ntBASIC16.86■□□□□ 0.29
SYVN1Q86TM6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.86■□□□□ 0.29
SYVN1Q86TM6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.85■□□□□ 0.29
SYVN1Q86TM6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms