Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PCDHA14-201ENST00000506751 2298 ntBASIC17.52■□□□□ 0.4
CASC4Q6P4E1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASC4Q6P4E1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 AL353593.2-201ENST00000602529 1483 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 KLF4P1-201ENST00000412782 1185 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 Z69720.1-201ENST00000601483 472 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 AC009336.1-201ENST00000608941 1553 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 AL135999.2-201ENST00000622438 1686 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 AC233702.3-201ENST00000578656 1387 ntBASIC17.51■□□□□ 0.39
CASC4Q6P4E1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASC4Q6P4E1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.5■□□□□ 0.39
CASC4Q6P4E1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 PCED1CP-201ENST00000419887 785 ntBASIC17.5■□□□□ 0.39
CASC4Q6P4E1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AC096582.2-201ENST00000510860 516 ntBASIC17.5■□□□□ 0.39
CASC4Q6P4E1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AC011467.2-201ENST00000598425 242 ntBASIC17.5■□□□□ 0.39
CASC4Q6P4E1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASC4Q6P4E1 FLJ38576-201ENST00000623820 2459 ntBASIC17.49■□□□□ 0.39
CASC4Q6P4E1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 AL118508.1-201ENST00000613502 2345 ntBASIC17.49■□□□□ 0.39
CASC4Q6P4E1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.49■□□□□ 0.39
CASC4Q6P4E1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms