Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 BX005266.1-201ENST00000473402 457 ntBASIC17.77■□□□□ 0.44
LRRC38Q5VT99 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 NKAPP1-205ENST00000585790 367 ntBASIC17.77■□□□□ 0.44
LRRC38Q5VT99 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AL589182.2-201ENST00000619332 1049 ntBASIC17.77■□□□□ 0.44
LRRC38Q5VT99 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC38Q5VT99 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 AL356309.3-201ENST00000624132 1934 ntBASIC17.76■□□□□ 0.43
LRRC38Q5VT99 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 KRT8P49-201ENST00000604166 1432 ntBASIC17.76■□□□□ 0.43
LRRC38Q5VT99 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 PCDHB19P-201ENST00000570871 2371 ntBASIC17.76■□□□□ 0.43
LRRC38Q5VT99 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 AC243591.1-201ENST00000452967 1364 ntBASIC17.76■□□□□ 0.43
LRRC38Q5VT99 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC38Q5VT99 HLA-A-202ENST00000376806 1854 ntBASIC17.75■□□□□ 0.43
LRRC38Q5VT99 AL391256.1-201ENST00000443260 1855 ntBASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 MIR1224-201ENST00000408193 85 ntBASIC17.75■□□□□ 0.43
LRRC38Q5VT99 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 AL355877.3-201ENST00000622820 899 ntBASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms